BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032D12SP1|AL429573
(873 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1639 1717 0.0
>3x_Contig1639
Length = 14140
Score = 1717 bits (866), Expect = 0.0
Identities = 873/874 (99%), Gaps = 1/874 (0%)
Strand = Plus / Plus
Query: 1 gatcccagtctttaccctggctatagtttgcagtatcgacacataatactctacccaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3697 gatcccagtctttaccctggctatagtttgcagtatcgacacataatactctacccaatg 3756
Query: 61 gaaggtcttgcaaacgatcaacgtcttcagtttcgacgaacaactgcatgtcaaatatcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3757 gaaggtcttgcaaacgatcaacgtcttcagtttcgacgaacaactgcatgtcaaatatcc 3816
Query: 121 atgtacagttcacaatagaaccgtcacctttcagagaactgatagtagatatatcaatcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3817 atgtacagttcacaatagaaccgtcacctttcagagaactgatagtagatatatcaatcg 3876
Query: 181 gactctctgtcttgaatttaatacaataaagaccagcttgatcaaatttgtcactcagtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3877 gactctctgtcttgaatttaatacaataaagaccagcttgatcaaatttgtcactcagtg 3936
Query: 241 acactttcacatcgttatcgaacagtagatattcaaacgtctcatcctcgtcaccgacca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3937 acactttcacatcgttatcgaacagtagatattcaaacgtctcatcctcgtcaccgacca 3996
Query: 301 ttattcttagctgagcatagaaaggtacatcttttctccggtaaggttcatcaagctgga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3997 ttattcttagctgagcatagaaaggtacatcttttctccggtaaggttcatcaagctgga 4056
Query: 361 tccagagcccaaattcctctattgagcgggcccattgctcaggcaattgaaaagtataac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4057 tccagagcccaaattcctctattgagcgggcccattgctcaggcaattgaaaagtataac 4116
Query: 421 tttcacctaatgtcaacgcagaaacaccagtattcagtaacaacgaaggattattcaacc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4117 tttcacctaatgtcaacgcagaaacaccagtattcagtaacaacgaaggattattcaacc 4176
Query: 481 aatcttgaactaatttccatttgtcagcaaccgttacatttggaaaccgtttagagtagg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4177 aatcttgaactaatttccatttgtcagcaaccgttacatttggaaaccgtttagagtagg 4236
Query: 541 attctaagtacgaaaagtaccatataggcaagaaacattgaattggttcgtttgttttgc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4237 attctaagtacgaaaagtaccatataggcaagaaacattgaattggttcgtttgttttgc 4296
Query: 601 ctattaatacgttcaaccactctataacgtgaggtgatgatttggcatcttcaggaaacg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4297 ctattaatacgttcaaccactctataacgtgaggtgatgatttggcatcttcaggaaacg 4356
Query: 661 gcagaatggcttgaagatcttgcagtagctcgaccattctagagaggagttgaaggttgc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4357 gcagaatggcttgaagatcttgcagtagctcgaccattctagagaggagttgaaggttgc 4416
Query: 721 -aacacgacgtatgcacgttcactagatagttcgagatacaggagacatctagttagacc 779
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4417 aaacacgacgtatgcacgttcactagatagttcgagatacaggagacatctagttagacc 4476
Query: 780 cttttctaccattgaatcattgatgatactaggagtcattttaggtaaaatagaagaaac 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4477 cttttctaccattgaatcattgatgatactaggagtcattttaggtaaaatagaagaaac 4536
Query: 840 aataatctgatcatgtgacccattgattggcttt 873
||||||||||||||||||||||||||||||||||
Sbjct: 4537 aataatctgatcatgtgacccattgattggcttt 4570
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6016
Number of Sequences: 1807
Number of extensions: 6016
Number of successful extensions: 25
Number of sequences better than 1.0e-20: 1
length of query: 873
length of database: 10,358,551
effective HSP length: 16
effective length of query: 857
effective length of database: 10,329,639
effective search space: 8852500623
effective search space used: 8852500623
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)